RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g40720.1 View Network Show in Genome Browser |
| Other Names | Os05g0485500 |
| Description | glycosyl transferase, family 8, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23874177-23878278 Nucleotide Length: 2004 |
| Protein-coding | LOC_Os05g40720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08600 LOC_Os02g41520 LOC_Os04g43700 LOC_Os02g20850 LOC_Os01g42850 LOC_Os01g65780 LOC_Os05g35200 LOC_Os02g35020 LOC_Os05g26890 LOC_Os02g58730 LOC_Os02g02840 More.. |
| Downstream Genes | LOC_Os06g12790 LOC_Os05g43820 LOC_Os12g18760 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR169i-5p.2 osa-miR1437b-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g40720.1 |
| Rice Genome Annotation | LOC_Os05g40720.1 |
| Ricechip | LOC_Os05g40720.1 |
| KEGG | osa:4339139 dosa:Os05t0485500-01 |
| Entrez-Gene | 4339139 |