RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g40820.1 View Network Show in Genome Browser |
| Other Names | Os05g0486700 |
| Description | ribosomal protein L24, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 23939790-23943173 Nucleotide Length: 486 |
| Protein-coding | LOC_Os05g40820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54870 LOC_Os01g47660 LOC_Os03g37970 LOC_Os04g52361 LOC_Os04g42380 LOC_Os01g61814 LOC_Os04g28180 LOC_Os02g37862 LOC_Os03g60400 LOC_Os02g47140 LOC_Os03g59310 More.. |
| Downstream Genes | LOC_Os05g49030 LOC_Os06g02510 LOC_Os08g10608 LOC_Os07g41750 LOC_Os09g32976 LOC_Os08g23710 LOC_Os12g38000 LOC_Os11g29190 LOC_Os06g35730 LOC_Os07g10660 LOC_Os10g08930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g40820.1 |
| Rice Genome Annotation | LOC_Os05g40820.1 |
| Ricechip | LOC_Os05g40820.1 |
| KEGG | osa:4339145 dosa:Os05t0486700-01 |
| Entrez-Gene | 4339145 |