RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g40990.1 View Network Show in Genome Browser |
| Other Names | Os05g0488900 |
| Description | NADH-cytochrome b5 reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24027775-24030928 Nucleotide Length: 849 |
| Protein-coding | LOC_Os05g40990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53250 LOC_Os04g48930 LOC_Os03g57120 LOC_Os02g01340 LOC_Os04g55960 LOC_Os01g48770 LOC_Os01g55040 LOC_Os05g07700 LOC_Os04g36720 LOC_Os03g05980 LOC_Os05g08360 More.. |
| Downstream Genes | LOC_Os09g38620 LOC_Os07g05400 LOC_Os06g01850 LOC_Os09g20090 LOC_Os11g11390 LOC_Os05g48320 LOC_Os09g19734 LOC_Os06g08380 LOC_Os08g14570 LOC_Os11g38959 LOC_Os12g32950 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00520 rn01110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g40990.1 |
| Rice Genome Annotation | LOC_Os05g40990.1 |
| Ricechip | LOC_Os05g40990.1 |
| KEGG | osa:4339153 dosa:Os05t0488900-01 |
| Entrez-Gene | 4339153 |