RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g41060.1 View Network Show in Genome Browser
Other Names	Os05g0489600
Description	ADP-ribosylation factor, putative, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 24057693-24059863 Nucleotide Length: 546
Protein-coding	LOC_Os05g41060

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0030234	enzyme regulator activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005773	vacuole	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g59790 LOC_Os03g59740 LOC_Os01g16030 LOC_Os03g14260 LOC_Os02g22090 LOC_Os03g13970 LOC_Os04g52270 LOC_Os03g17020 LOC_Os01g51170 LOC_Os05g31290 LOC_Os02g09940 More..
Downstream Genes	LOC_Os09g34970 LOC_Os07g12200 LOC_Os07g12170 LOC_Os06g42000 LOC_Os07g10150 LOC_Os11g07280 LOC_Os08g15040 LOC_Os06g12790 LOC_Os11g28340 LOC_Os09g31180 LOC_Os12g37360 More..

miRNA Regulations
miRNAs	osa-miR1320-3p

Database Links
Gramene	LOC_Os05g41060.1
Rice Genome Annotation	LOC_Os05g41060.1
Ricechip	LOC_Os05g41060.1
KEGG	osa:4339157 dosa:Os05t0489600-01
Entrez-Gene	4339157