RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41190.2 View Network Show in Genome Browser |
| Other Names | Os05g0490900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24127105-24128432 Nucleotide Length: 387 |
| Protein-coding | LOC_Os05g41190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g62630 LOC_Os03g34040 LOC_Os01g25600 LOC_Os03g21560 LOC_Os03g52660 LOC_Os03g56869 LOC_Os03g59640 LOC_Os02g22260 LOC_Os03g12020 LOC_Os02g53330 LOC_Os02g39740 More.. |
| Downstream Genes | LOC_Os06g49160 LOC_Os10g35810 LOC_Os08g44810 LOC_Os06g09610 LOC_Os08g42850 LOC_Os06g04150 LOC_Os07g11110 LOC_Os09g13600 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41190.2 |
| Rice Genome Annotation | LOC_Os05g41190.2 |
| Ricechip | LOC_Os05g41190.2 |
| KEGG | osa:4339170 dosa:Os05t0490900-01 |
| Entrez-Gene | 4339170 |