RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41220.1 View Network Show in Genome Browser |
| Other Names | Os05g0491200 |
| Description | SNF1-related protein kinase regulatory subunit beta-1, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24137575-24141002 Nucleotide Length: 873 |
| Protein-coding | LOC_Os05g41220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g32880 LOC_Os03g63940 LOC_Os03g17980 LOC_Os01g27140 LOC_Os01g19450 LOC_Os02g02720 LOC_Os03g20340 LOC_Os02g01740 LOC_Os04g42010 LOC_Os03g53220 LOC_Os03g50330 More.. |
| Downstream Genes | LOC_Os05g45420 LOC_Os08g37800 LOC_Os11g05494 LOC_Os08g17600 LOC_Os10g26050 LOC_Os10g14180 LOC_Os07g06860 LOC_Os06g31210 LOC_Os07g48790 LOC_Os05g50600 LOC_Os06g35814 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41220.1 |
| Rice Genome Annotation | LOC_Os05g41220.1 |
| Ricechip | LOC_Os05g41220.1 |
| KEGG | osa:4339173 dosa:Os05t0491200-01 |
| Entrez-Gene | 4339173 |