RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41390.1 View Network Show in Genome Browser |
| Other Names | Os05g0493500 |
| Description | cyclin, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24240401-24243654 Nucleotide Length: 1350 |
| Protein-coding | LOC_Os05g41390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52750 LOC_Os01g70560 LOC_Os03g39020 LOC_Os04g46660 LOC_Os01g27940 LOC_Os04g53680 LOC_Os05g33040 LOC_Os03g10070 LOC_Os01g59120 LOC_Os04g41900 LOC_Os02g05040 More.. |
| Downstream Genes | LOC_Os12g30020 LOC_Os08g40170 LOC_Os10g41430 LOC_Os09g36440 LOC_Os09g38450 LOC_Os08g42020 LOC_Os05g43140 LOC_Os07g32390 LOC_Os09g32680 LOC_Os11g37100 LOC_Os08g44420 More.. |
| Reference | |
|---|---|
| PubMed | 16435118 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41390.1 |
| Rice Genome Annotation | LOC_Os05g41390.1 |
| Ricechip | LOC_Os05g41390.1 |
| KEGG | osa:4339185 dosa:Os05t0493500-00 |
| Entrez-Gene | 4339185 |