RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41480.1 View Network Show in Genome Browser |
| Other Names | Os05g0494500 |
| Description | domain of unknown function, DUF250 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24287569-24289620 Nucleotide Length: 1065 |
| Protein-coding | LOC_Os05g41480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g38610 LOC_Os05g06700 LOC_Os05g12490 LOC_Os02g46380 LOC_Os02g40090 LOC_Os05g39670 LOC_Os01g40660 LOC_Os05g33210 LOC_Os01g36630 LOC_Os05g41060 LOC_Os01g59790 More.. |
| Downstream Genes | LOC_Os09g38510 LOC_Os07g39280 LOC_Os09g38530 LOC_Os07g10830 LOC_Os11g20790 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41480.1 |
| Rice Genome Annotation | LOC_Os05g41480.1 |
| Ricechip | LOC_Os05g41480.1 |
| KEGG | osa:4339191 dosa:Os05t0494500-01 |
| Entrez-Gene | 4339191 |