RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41590.1 View Network Show in Genome Browser |
| Other Names | Os05g0495700 |
| Description | glycerol-3-phosphate dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24357908-24361190 Nucleotide Length: 1398 |
| Protein-coding | LOC_Os05g41590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g40730 LOC_Os01g11710 LOC_Os05g38420 LOC_Os05g38410 LOC_Os02g40500 LOC_Os03g12030 LOC_Os04g42930 LOC_Os02g43180 LOC_Os02g58720 LOC_Os01g27140 LOC_Os05g28520 More.. |
| Downstream Genes | LOC_Os11g30560 LOC_Os06g06250 LOC_Os12g29990 LOC_Os12g34524 LOC_Os12g35340 LOC_Os08g45140 LOC_Os06g34790 LOC_Os06g44910 LOC_Os06g12030 LOC_Os06g05550 LOC_Os11g02350 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41590.1 |
| Rice Genome Annotation | LOC_Os05g41590.1 |
| Ricechip | LOC_Os05g41590.1 |
| KEGG | osa:4339200 dosa:Os05t0495700-01 |
| Entrez-Gene | 4339200 |