RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41630.1 View Network Show in Genome Browser |
| Other Names | Os05g0496100 |
| Description | translation initiation factor eIF3 subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24376912-24377903 Nucleotide Length: 603 |
| Protein-coding | LOC_Os05g41630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03070 LOC_Os04g42270 LOC_Os03g22340 LOC_Os04g32710 LOC_Os04g27860 LOC_Os02g27769 LOC_Os03g38260 LOC_Os03g21940 LOC_Os01g04730 LOC_Os01g24690 LOC_Os03g08450 More.. |
| Downstream Genes | LOC_Os11g24610 LOC_Os08g02340 LOC_Os07g47710 LOC_Os12g05430 LOC_Os10g41960 LOC_Os07g03230 LOC_Os05g49150 LOC_Os08g21660 LOC_Os10g27190 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41630.1 |
| Rice Genome Annotation | LOC_Os05g41630.1 |
| Ricechip | LOC_Os05g41630.1 |
| KEGG | osa:4339203 dosa:Os05t0496100-00 |
| Entrez-Gene | 4339203 |