RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41750.1 View Network Show in Genome Browser |
| Other Names | Os05g0497150 |
| Description | RecF/RecN/SMC N terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24423072-24426490 Nucleotide Length: 1452 |
| Protein-coding | LOC_Os05g41750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67740 LOC_Os01g72800 LOC_Os01g34870 LOC_Os05g39850 LOC_Os02g47150 LOC_Os03g02970 LOC_Os02g03060 LOC_Os04g47580 LOC_Os01g16650 LOC_Os03g05300 LOC_Os02g58020 More.. |
| Downstream Genes | LOC_Os07g46540 LOC_Os07g33360 LOC_Os08g40170 LOC_Os09g14610 LOC_Os07g32480 LOC_Os06g43760 LOC_Os07g32390 LOC_Os06g25250 LOC_Os11g05556 LOC_Os05g51790 LOC_Os12g03130 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41750.1 |
| Rice Genome Annotation | LOC_Os05g41750.1 |
| Ricechip | LOC_Os05g41750.1 |
| KEGG | dosa:Os05t0497150-01 |