RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41800.1 View Network Show in Genome Browser |
| Other Names | Os05g0497675 |
| Description | ribosomal protein L11 methyltransferase-related, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24480751-24483094 Nucleotide Length: 1230 |
| Protein-coding | LOC_Os05g41800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51984 LOC_Os04g44890 LOC_Os04g02730 LOC_Os01g13150 LOC_Os03g31690 LOC_Os03g17520 LOC_Os02g09590 LOC_Os03g19930 LOC_Os02g47850 LOC_Os05g22940 LOC_Os03g12236 More.. |
| Downstream Genes | LOC_Os06g49870 LOC_Os08g10570 LOC_Os07g10540 LOC_Os09g36800 LOC_Os11g33330 LOC_Os06g45360 LOC_Os08g43490 LOC_Os07g39690 LOC_Os11g47800 LOC_Os05g51150 LOC_Os11g26160 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41800.1 |
| Rice Genome Annotation | LOC_Os05g41800.1 |
| Ricechip | LOC_Os05g41800.1 |
| KEGG | osa:9268339 dosa:Os05t0497675-01 |
| Entrez-Gene | 9268339 |