RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41810.1 View Network Show in Genome Browser |
| Other Names | Os05g0497700 |
| Description | OsDegp8 - Putative Deg protease homologue, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24483670-24488993 Nucleotide Length: 2169 |
| Protein-coding | LOC_Os05g41810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g34460 LOC_Os02g50880 LOC_Os05g38580 LOC_Os01g62210 LOC_Os02g06700 LOC_Os02g33140 LOC_Os03g60100 LOC_Os03g45970 LOC_Os03g39850 LOC_Os03g57200 LOC_Os05g34150 More.. |
| Downstream Genes | LOC_Os08g31470 LOC_Os11g14170 LOC_Os10g34020 LOC_Os09g20220 LOC_Os08g21840 LOC_Os07g05800 LOC_Os09g29200 LOC_Os09g07910 LOC_Os06g39700 LOC_Os10g22070 LOC_Os07g46440 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41810.1 |
| Rice Genome Annotation | LOC_Os05g41810.1 |
| Ricechip | LOC_Os05g41810.1 |
| KEGG | osa:4339212 dosa:Os05t0497700-01 |
| Entrez-Gene | 4339212 |