RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41900.1 View Network Show in Genome Browser |
| Other Names | Os05g0498400 |
| Description | translation initiation factor SUI1, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24537785-24539935 Nucleotide Length: 348 |
| Protein-coding | LOC_Os05g41900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03070 LOC_Os01g09890 LOC_Os02g35160 LOC_Os05g16660 LOC_Os02g54700 LOC_Os03g21550 LOC_Os03g18510 LOC_Os01g27940 LOC_Os04g02150 LOC_Os05g13950 LOC_Os05g01450 More.. |
| Downstream Genes | LOC_Os10g41960 LOC_Os08g21660 LOC_Os07g03230 LOC_Os06g48350 LOC_Os09g15770 LOC_Os07g48300 LOC_Os07g49220 LOC_Os05g49150 LOC_Os06g23440 LOC_Os12g41400 LOC_Os07g12110 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41900.1 |
| Rice Genome Annotation | LOC_Os05g41900.1 |
| Ricechip | LOC_Os05g41900.1 |
| KEGG | osa:4339216 dosa:Os05t0498400-01 |
| Entrez-Gene | 4339216 |