RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g41990.1 View Network Show in Genome Browser |
| Other Names | Os05g0499300 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24583250-24584945 Nucleotide Length: 981 |
| Protein-coding | LOC_Os05g41990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73980 LOC_Os01g06580 LOC_Os03g02240 LOC_Os02g18410 LOC_Os04g52370 LOC_Os05g04820 LOC_Os03g17760 LOC_Os03g45920 LOC_Os01g19220 LOC_Os02g56920 LOC_Os02g40260 More.. |
| Downstream Genes | LOC_Os11g35350 LOC_Os07g01370 LOC_Os12g07160 LOC_Os11g29370 LOC_Os10g06000 LOC_Os10g05990 LOC_Os10g05980 LOC_Os10g05970 LOC_Os11g02350 LOC_Os08g16260 LOC_Os09g25850 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g41990.1 |
| Rice Genome Annotation | LOC_Os05g41990.1 |
| Ricechip | LOC_Os05g41990.1 |
| KEGG | osa:4339222 dosa:Os05t0499300-01 |
| Entrez-Gene | 4339222 |