RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g42000.1 View Network Show in Genome Browser |
| Other Names | Os05g0499400 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24587145-24589539 Nucleotide Length: 1050 |
| Protein-coding | LOC_Os05g42000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g13980 LOC_Os02g34430 LOC_Os02g25060 LOC_Os05g04820 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g42000.1 |
| Rice Genome Annotation | LOC_Os05g42000.1 |
| Ricechip | LOC_Os05g42000.1 |
| KEGG | osa:4339223 dosa:Os05t0499400-01 |
| Entrez-Gene | 4339223 |