RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g42270.1 View Network Show in Genome Browser |
| Other Names | Os05g0502200 |
| Description | acyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24724324-24727260 Nucleotide Length: 1194 |
| Protein-coding | LOC_Os05g42270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g53370 LOC_Os01g70570 LOC_Os01g52790 LOC_Os03g54091 LOC_Os04g55720 LOC_Os01g57650 LOC_Os01g05090 LOC_Os03g47550 LOC_Os01g43710 |
| Downstream Genes | LOC_Os06g49790 LOC_Os07g34730 LOC_Os09g10850 LOC_Os08g28190 LOC_Os06g01400 LOC_Os08g34720 LOC_Os06g44460 LOC_Os10g42490 LOC_Os10g41040 LOC_Os07g07550 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00561 rn00564 rn01100 |
| Metacyc Pathways | PHOSLIPSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g42270.1 |
| Rice Genome Annotation | LOC_Os05g42270.1 |
| Ricechip | LOC_Os05g42270.1 |
| KEGG | osa:4339242 dosa:Os05t0502200-01 |
| Entrez-Gene | 4339242 |