RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g42330.2 View Network Show in Genome Browser |
| Other Names | Os05g0503000 |
| Description | secretory carrier-associated membrane protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 24763762-24767769 Nucleotide Length: 651 |
| Protein-coding | LOC_Os05g42330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g02820 LOC_Os03g63920 LOC_Os03g01910 LOC_Os01g57220 LOC_Os02g07490 LOC_Os02g32740 LOC_Os03g38590 LOC_Os03g43890 LOC_Os03g50850 LOC_Os01g64490 LOC_Os03g38600 More.. |
| Downstream Genes | LOC_Os07g37740 LOC_Os11g16540 LOC_Os07g38730 LOC_Os10g34180 LOC_Os06g20390 LOC_Os12g04220 LOC_Os11g04460 LOC_Os06g45590 LOC_Os06g36050 LOC_Os12g08180 LOC_Os08g06440 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g42330.2 |
| Rice Genome Annotation | LOC_Os05g42330.2 |
| Ricechip | LOC_Os05g42330.2 |
| KEGG | osa:4339247 dosa:Os05t0503000-01 |
| Entrez-Gene | 4339247 |