RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g43170.1 View Network Show in Genome Browser |
| Other Names | Os05g0507300 |
| Description | calreticulin precursor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25054711-25059191 Nucleotide Length: 1269 |
| Protein-coding | LOC_Os05g43170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g71400 LOC_Os03g51430 LOC_Os03g01180 LOC_Os02g36940 LOC_Os02g02410 LOC_Os02g36950 LOC_Os01g58730 LOC_Os05g35400 LOC_Os04g35600 LOC_Os03g50250 LOC_Os02g34940 More.. |
| Downstream Genes | LOC_Os09g37600 LOC_Os06g05520 LOC_Os06g19690 LOC_Os09g29370 LOC_Os11g09010 LOC_Os11g09280 LOC_Os09g27830 LOC_Os08g09770 LOC_Os10g33140 LOC_Os08g17680 LOC_Os11g30760 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g43170.1 |
| Rice Genome Annotation | LOC_Os05g43170.1 |
| Ricechip | LOC_Os05g43170.1 |
| KEGG | osa:4339262 dosa:Os05t0507300-01 |
| Entrez-Gene | 4339262 |