RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g43310.1 View Network Show in Genome Browser |
| Other Names | Os05g0508900 |
| Description | photosystem II reaction center W protein, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25193458-25194714 Nucleotide Length: 387 |
| Protein-coding | LOC_Os05g43310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g17170 LOC_Os01g72950 LOC_Os04g33830 LOC_Os02g34810 |
| Downstream Genes | LOC_Os06g01850 LOC_Os07g47640 LOC_Os12g23200 LOC_Os07g38960 LOC_Os09g30340 LOC_Os11g13890 LOC_Os07g37240 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g43310.1 |
| Rice Genome Annotation | LOC_Os05g43310.1 |
| Ricechip | LOC_Os05g43310.1 |
| KEGG | osa:4339270 dosa:Os05t0508900-01 |
| Entrez-Gene | 4339270 |