RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g43360.1 View Network Show in Genome Browser |
| Other Names | Os05g0509200 |
| Description | NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25214532-25217860 Nucleotide Length: 825 |
| Protein-coding | LOC_Os05g43360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g50540 LOC_Os03g56300 LOC_Os01g52214 LOC_Os03g30610 LOC_Os01g33960 LOC_Os02g24574 LOC_Os01g49190 LOC_Os02g32120 LOC_Os04g24520 LOC_Os05g34770 LOC_Os01g61380 More.. |
| Downstream Genes | LOC_Os07g45090 LOC_Os05g45730 LOC_Os07g41300 LOC_Os07g02580 LOC_Os12g14939 LOC_Os12g19420 LOC_Os06g22010 LOC_Os10g17280 LOC_Os05g47980 LOC_Os07g44650 LOC_Os12g34010 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-4302 PWY-3781 AERESPDON-PWY ANARESPDON-PWY PWY-5083 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g43360.1 |
| Rice Genome Annotation | LOC_Os05g43360.1 |
| Ricechip | LOC_Os05g43360.1 |
| KEGG | osa:4339271 dosa:Os05t0509200-01 |
| Entrez-Gene | 4339271 |