RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g43440.1 View Network Show in Genome Browser |
| Other Names | Os05g0509700 |
| Description | single-stranded DNA-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25254810-25259747 Nucleotide Length: 621 |
| Protein-coding | LOC_Os05g43440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g43420 LOC_Os01g72049 LOC_Os02g45520 LOC_Os01g64690 LOC_Os04g48390 LOC_Os01g62210 |
| Downstream Genes | LOC_Os06g03860 LOC_Os09g34990 LOC_Os06g39700 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g43440.1 |
| Rice Genome Annotation | LOC_Os05g43440.1 |
| Ricechip | LOC_Os05g43440.1 |
| KEGG | osa:4339275 dosa:Os05t0509700-01 |
| Entrez-Gene | 4339275 |