RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g43530.1 View Network Show in Genome Browser |
| Other Names | Os05g0510800 |
| Description | CSLC7 - cellulose synthase-like family C, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25300749-25304668 Nucleotide Length: 2067 |
| Protein-coding | LOC_Os05g43530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60939 LOC_Os03g60700 LOC_Os03g18820 LOC_Os04g43360 LOC_Os02g53200 |
| Downstream Genes | LOC_Os05g45210 LOC_Os08g28730 LOC_Os05g46580 LOC_Os06g06790 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00563 rn01100 |
| Metacyc Pathways | PWY-5338 PWY-2901 PWY-2881 PWY-2902 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g43530.1 |
| Rice Genome Annotation | LOC_Os05g43530.1 |
| Ricechip | LOC_Os05g43530.1 |
| KEGG | osa:4339283 dosa:Os05t0510800-01 |
| Entrez-Gene | 4339283 |