RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g43610.1 View Network Show in Genome Browser |
| Other Names | Os05g0512000 |
| Description | ATBARD1/BARD1, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25357229-25362761 Nucleotide Length: 2964 |
| Protein-coding | LOC_Os05g43610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05260 LOC_Os02g03060 LOC_Os03g02680 LOC_Os03g01850 LOC_Os01g01689 LOC_Os05g39850 LOC_Os03g43890 LOC_Os03g45760 LOC_Os05g19270 LOC_Os03g11540 LOC_Os02g09060 More.. |
| Downstream Genes | LOC_Os09g24220 LOC_Os11g40150 LOC_Os09g37920 LOC_Os12g31370 LOC_Os12g39210 LOC_Os12g31810 LOC_Os11g08660 LOC_Os08g31930 LOC_Os12g25120 LOC_Os08g33100 LOC_Os07g36130 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g43610.1 |
| Rice Genome Annotation | LOC_Os05g43610.1 |
| Ricechip | LOC_Os05g43610.1 |
| KEGG | osa:4339293 dosa:Os05t0512000-01 |
| Entrez-Gene | 4339293 |