RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g43760.1 View Network Show in Genome Browser |
| Other Names | Os05g0513100 |
| Description | TCP family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25436354-25438703 Nucleotide Length: 885 |
| Protein-coding | LOC_Os05g43760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g44440 LOC_Os02g51280 LOC_Os02g42380 LOC_Os01g69980 |
| Downstream Genes | LOC_Os12g07480 LOC_Os08g43160 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g43760.1 |
| Rice Genome Annotation | LOC_Os05g43760.1 |
| Ricechip | LOC_Os05g43760.1 |
| KEGG | osa:4339298 dosa:Os05t0513100-01 |
| Entrez-Gene | 4339298 |