RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g43770.1 View Network Show in Genome Browser |
| Other Names | Os05g0513200 |
| Description | NLI interacting factor-like phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25446886-25452570 Nucleotide Length: 1101 |
| Protein-coding | LOC_Os05g43770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32430 LOC_Os03g02390 LOC_Os05g03910 LOC_Os01g16910 LOC_Os03g30200 LOC_Os01g65450 LOC_Os02g55270 LOC_Os03g20750 LOC_Os04g56480 LOC_Os02g45100 LOC_Os03g62490 More.. |
| Downstream Genes | LOC_Os07g22700 LOC_Os10g37530 LOC_Os07g41330 LOC_Os11g31890 LOC_Os07g47420 LOC_Os07g15880 LOC_Os11g37510 LOC_Os06g46700 LOC_Os06g46690 LOC_Os08g36490 LOC_Os11g10100 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g43770.1 |
| Rice Genome Annotation | LOC_Os05g43770.1 |
| Ricechip | LOC_Os05g43770.1 |
| KEGG | osa:4339299 dosa:Os05t0513200-00 |
| Entrez-Gene | 4339299 |