RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g43820.1 View Network Show in Genome Browser |
| Other Names | Os05g0513800 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25474799-25477947 Nucleotide Length: 645 |
| Protein-coding | LOC_Os05g43820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g58730 LOC_Os02g20850 LOC_Os02g02840 LOC_Os02g50860 LOC_Os01g12900 LOC_Os02g48730 LOC_Os05g28290 LOC_Os01g73310 LOC_Os02g55970 LOC_Os05g01600 LOC_Os03g27250 More.. |
| Downstream Genes | LOC_Os06g21340 LOC_Os06g12790 LOC_Os09g27650 LOC_Os06g07830 LOC_Os08g43130 LOC_Os08g42000 LOC_Os08g36390 LOC_Os11g06390 LOC_Os07g31370 LOC_Os10g36650 LOC_Os06g45050 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g43820.1 |
| Rice Genome Annotation | LOC_Os05g43820.1 |
| Ricechip | LOC_Os05g43820.1 |
| KEGG | osa:4339304 dosa:Os05t0513800-01 |
| Entrez-Gene | 4339304 |