RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g44170.1 View Network Show in Genome Browser |
| Other Names | Os05g0517900 |
| Description | cyclic phosphodiesterase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25666144-25667391 Nucleotide Length: 558 |
| Protein-coding | LOC_Os05g44170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13100 LOC_Os04g58090 LOC_Os02g24080 |
| Downstream Genes | LOC_Os09g20860 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g44170.1 |
| Rice Genome Annotation | LOC_Os05g44170.1 |
| Ricechip | LOC_Os05g44170.1 |
| KEGG | osa:4339332 dosa:Os05t0517900-01 |
| Entrez-Gene | 4339332 |