RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g44320.1 View Network Show in Genome Browser |
| Other Names | Os05g0519500 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25788753-25793522 Nucleotide Length: 2667 |
| Protein-coding | LOC_Os05g44320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g50660 LOC_Os03g05720 LOC_Os05g08360 LOC_Os03g22880 LOC_Os04g46310 LOC_Os03g21530 LOC_Os01g13730 LOC_Os02g57590 LOC_Os03g61790 LOC_Os03g52470 LOC_Os02g50370 More.. |
| Downstream Genes | LOC_Os07g41190 LOC_Os06g43690 LOC_Os07g10350 LOC_Os09g18320 LOC_Os12g07300 LOC_Os12g06910 LOC_Os07g47420 LOC_Os10g10434 LOC_Os12g04010 LOC_Os07g12320 LOC_Os08g05880 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g44320.1 |
| Rice Genome Annotation | LOC_Os05g44320.1 |
| Ricechip | LOC_Os05g44320.1 |
| KEGG | osa:4339341 dosa:Os05t0519500-02 |
| Entrez-Gene | 4339341 |