RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g44360.1 View Network Show in Genome Browser |
| Other Names | Os05g0519900 |
| Description | oligosaccharyl transferase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 25811184-25815696 Nucleotide Length: 2364 |
| Protein-coding | LOC_Os05g44360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53800 LOC_Os05g06440 LOC_Os02g48110 LOC_Os02g02410 LOC_Os02g08180 LOC_Os01g38510 LOC_Os01g40660 LOC_Os05g36070 LOC_Os01g68324 LOC_Os04g57890 LOC_Os03g36730 More.. |
| Downstream Genes | LOC_Os06g39260 LOC_Os09g27830 LOC_Os11g09280 LOC_Os08g17680 LOC_Os07g10830 LOC_Os07g14270 LOC_Os09g38530 LOC_Os06g49480 LOC_Os06g05740 LOC_Os10g38930 LOC_Os06g50300 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00510 rn00513 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g44360.1 |
| Rice Genome Annotation | LOC_Os05g44360.1 |
| Ricechip | LOC_Os05g44360.1 |
| KEGG | osa:4339345 dosa:Os05t0519900-02 |
| Entrez-Gene | 4339345 |