RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g44916.2 View Network Show in Genome Browser |
| Other Names | Os05g0524300 |
| Description | mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26101976-26106425 Nucleotide Length: 1149 |
| Protein-coding | LOC_Os05g44916 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51390 LOC_Os01g57073 LOC_Os03g21810 LOC_Os02g52390 LOC_Os03g11410 LOC_Os01g72800 LOC_Os01g57082 LOC_Os04g58090 LOC_Os05g03910 LOC_Os03g58030 LOC_Os02g53420 More.. |
| Downstream Genes | LOC_Os07g38270 LOC_Os07g38260 LOC_Os12g04010 LOC_Os11g04200 LOC_Os07g38280 LOC_Os06g41990 LOC_Os11g38600 LOC_Os06g07896 LOC_Os12g34550 LOC_Os07g44190 LOC_Os06g04620 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g44916.2 |
| Rice Genome Annotation | LOC_Os05g44916.2 |
| Ricechip | LOC_Os05g44916.2 |
| KEGG | osa:4339368 dosa:Os05t0524300-01 |
| Entrez-Gene | 4339368 |