RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g45210.1 View Network Show in Genome Browser |
| Other Names | Os05g0528000 |
| Description | respiratory burst oxidase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26237458-26245892 Nucleotide Length: 2856 |
| Protein-coding | LOC_Os05g45210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g49600 LOC_Os02g53130 LOC_Os04g55960 LOC_Os05g43530 LOC_Os02g07870 LOC_Os01g73310 LOC_Os01g25820 LOC_Os05g01600 LOC_Os04g42620 LOC_Os01g02930 LOC_Os02g20850 More.. |
| Downstream Genes | LOC_Os07g14850 LOC_Os09g27030 LOC_Os06g39750 LOC_Os08g18044 LOC_Os11g18170 LOC_Os08g36500 LOC_Os08g36480 LOC_Os09g38620 LOC_Os08g14570 LOC_Os11g05880 LOC_Os11g32240 More.. |
| Reference | |
|---|---|
| PubMed | 22448275 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g45210.1 |
| Rice Genome Annotation | LOC_Os05g45210.1 |
| Ricechip | LOC_Os05g45210.1 |
| KEGG | osa:4339397 dosa:Os05t0528000-01 |
| Entrez-Gene | 4339397 |