RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g45310.1 View Network Show in Genome Browser |
| Other Names | Os05g0529300 |
| Description | ER lumen protein retaining receptor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26288908-26291990 Nucleotide Length: 648 |
| Protein-coding | LOC_Os05g45310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g12740 LOC_Os03g17020 LOC_Os01g17430 LOC_Os02g22090 LOC_Os04g59494 LOC_Os05g41060 LOC_Os02g03540 LOC_Os01g59790 LOC_Os03g37984 LOC_Os03g52340 LOC_Os03g60939 More.. |
| Downstream Genes | LOC_Os11g07280 LOC_Os11g48020 LOC_Os07g01150 LOC_Os10g33770 LOC_Os09g27830 LOC_Os07g12200 LOC_Os07g12170 LOC_Os12g36950 LOC_Os07g08330 LOC_Os08g42020 LOC_Os06g35730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g45310.1 |
| Rice Genome Annotation | LOC_Os05g45310.1 |
| Ricechip | LOC_Os05g45310.1 |
| KEGG | osa:4339403 dosa:Os05t0529300-01 |
| Entrez-Gene | 4339403 |