RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g45420.2 View Network Show in Genome Browser
Other Names	Os05g0530500
Description	CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 26346997-26351611 Nucleotide Length: 1518
Protein-coding	LOC_Os05g45420

Gene Ontology Classification
GO	Name	Type	Code
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0009991	response to extracellular stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g63940 LOC_Os03g20340 LOC_Os05g41220 LOC_Os03g58160 LOC_Os04g32880 LOC_Os01g72790 LOC_Os03g17700 LOC_Os02g05630 LOC_Os03g02680 LOC_Os05g32360 LOC_Os03g40400 More..
Downstream Genes	LOC_Os07g48790 LOC_Os10g42950 LOC_Os09g32680 LOC_Os06g06090 LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g33549 LOC_Os06g33530 LOC_Os10g28040 LOC_Os09g36710 LOC_Os08g43540 More..

miRNA Regulations
miRNAs	osa-miR395x

Reference
PubMed	17766403

Database Links
Gramene	LOC_Os05g45420.2
Rice Genome Annotation	LOC_Os05g45420.2
Ricechip	LOC_Os05g45420.2
KEGG	osa:4339410 dosa:Os05t0530500-02
Entrez-Gene	4339410