RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g45590.1 View Network Show in Genome Browser |
| Other Names | Os05g0532600 |
| Description | hexokinase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26418621-26422556 Nucleotide Length: 1485 |
| Protein-coding | LOC_Os05g45590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74000 LOC_Os03g56460 LOC_Os02g02560 LOC_Os01g09460 LOC_Os05g07130 LOC_Os03g18310 LOC_Os05g44210 LOC_Os01g40570 LOC_Os02g48110 LOC_Os01g44130 LOC_Os03g03920 More.. |
| Downstream Genes | LOC_Os10g11140 LOC_Os09g38030 LOC_Os06g14510 LOC_Os08g42730 LOC_Os10g39620 LOC_Os11g42160 LOC_Os05g51550 LOC_Os08g04280 LOC_Os05g49200 LOC_Os09g36270 LOC_Os09g19734 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00521 rn00524 rn01110 rn00520 rn00051 rn00052 rn00010 rn01100 rn01120 rn00500 |
| Metacyc Pathways | P124-PWY PWY-6693 PWY-6531 PWY-842 PWY-621 P122-PWY SUCUTIL-PWY PWY-5384 PWY-3801 MANGDPMET-PWY MANNCAT-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g45590.1 |
| Rice Genome Annotation | LOC_Os05g45590.1 |
| Ricechip | LOC_Os05g45590.1 |
| KEGG | osa:4339420 dosa:Os05t0532600-01 |
| Entrez-Gene | 4339420 |