RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g45710.1 View Network Show in Genome Browser |
| Other Names | Os05g0533500 |
| Description | serine acetyltransferase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26480056-26481404 Nucleotide Length: 945 |
| Protein-coding | LOC_Os05g45710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62840 LOC_Os02g56740 LOC_Os03g16150 LOC_Os02g30460 LOC_Os01g52400 LOC_Os01g18070 LOC_Os03g52460 LOC_Os05g25400 LOC_Os05g06350 LOC_Os01g14950 LOC_Os01g24060 More.. |
| Downstream Genes | LOC_Os07g04200 LOC_Os08g13930 LOC_Os12g07220 LOC_Os06g23160 LOC_Os07g44840 LOC_Os11g13420 LOC_Os07g33850 LOC_Os06g05820 LOC_Os09g38420 LOC_Os10g32570 LOC_Os08g44380 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn00920 rn01100 rn01120 |
| Metacyc Pathways | CYSTSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g45710.1 |
| Rice Genome Annotation | LOC_Os05g45710.1 |
| Ricechip | LOC_Os05g45710.1 |
| KEGG | osa:4339425 dosa:Os05t0533500-01 |
| Entrez-Gene | 4339425 |