RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g45730.1 View Network Show in Genome Browser |
| Other Names | Os05g0533700 |
| Description | ubiquinone oxidoreductase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26494486-26497211 Nucleotide Length: 615 |
| Protein-coding | LOC_Os05g45730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56300 LOC_Os05g43360 LOC_Os03g50540 LOC_Os02g24574 LOC_Os01g33960 LOC_Os05g23620 LOC_Os01g70960 LOC_Os03g09210 LOC_Os02g57180 LOC_Os01g49190 LOC_Os05g34770 More.. |
| Downstream Genes | LOC_Os07g45090 LOC_Os07g41300 LOC_Os12g14939 LOC_Os05g47980 LOC_Os10g17280 LOC_Os07g31300 LOC_Os08g06430 LOC_Os12g34010 LOC_Os06g43850 LOC_Os11g48040 LOC_Os08g33720 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-4302 PWY-3781 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g45730.1 |
| Rice Genome Annotation | LOC_Os05g45730.1 |
| Ricechip | LOC_Os05g45730.1 |
| KEGG | osa:4339427 dosa:Os05t0533700-01 |
| Entrez-Gene | 4339427 |