RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g45740.1 View Network Show in Genome Browser |
| Other Names | Os05g0533800 |
| Description | mitochondrial ATP synthase g subunit family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26497701-26499634 Nucleotide Length: 378 |
| Protein-coding | LOC_Os05g45740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g40820 LOC_Os01g59990 LOC_Os05g36280 LOC_Os04g34240 LOC_Os01g64640 LOC_Os05g28750 LOC_Os01g19840 LOC_Os03g13170 LOC_Os03g29460 LOC_Os03g14530 LOC_Os02g54700 More.. |
| Downstream Genes | LOC_Os09g20090 LOC_Os06g02510 LOC_Os07g42950 LOC_Os11g05730 LOC_Os06g06510 LOC_Os06g06460 LOC_Os12g38000 LOC_Os09g39500 LOC_Os08g02410 LOC_Os07g12250 LOC_Os06g14510 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn01100 rn00680 rn00190 rn00195 |
| Metacyc Pathways | PWY-6126 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g45740.1 |
| Rice Genome Annotation | LOC_Os05g45740.1 |
| Ricechip | LOC_Os05g45740.1 |
| KEGG | osa:4339428 dosa:Os05t0533800-01 |
| Entrez-Gene | 4339428 |