RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g45770.2 View Network Show in Genome Browser |
| Other Names | Os05g0534100 |
| Description | Divergent PAP2 family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26507610-26510075 Nucleotide Length: 696 |
| Protein-coding | LOC_Os05g45770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g59070 LOC_Os03g17940 LOC_Os02g44290 LOC_Os01g04660 LOC_Os05g14580 LOC_Os01g14630 LOC_Os02g44780 |
| Downstream Genes | LOC_Os08g27040 LOC_Os08g27030 LOC_Os07g39270 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1428a-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g45770.2 |
| Rice Genome Annotation | LOC_Os05g45770.2 |
| Ricechip | LOC_Os05g45770.2 |
| KEGG | osa:4339431 dosa:Os05t0534100-01 |
| Entrez-Gene | 4339431 |