RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g45930.1 View Network Show in Genome Browser |
| Other Names | Os05g0535900 |
| Description | IQ calmodulin-binding motif family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26616540-26620925 Nucleotide Length: 1725 |
| Protein-coding | LOC_Os05g45930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54080 LOC_Os02g53520 LOC_Os04g58470 LOC_Os01g70100 LOC_Os02g52280 LOC_Os05g30750 LOC_Os01g73790 LOC_Os05g02820 LOC_Os02g47420 LOC_Os01g67240 LOC_Os03g16010 More.. |
| Downstream Genes | LOC_Os07g38060 LOC_Os06g20370 LOC_Os09g32250 LOC_Os12g07160 LOC_Os07g46170 LOC_Os06g01500 LOC_Os09g37270 LOC_Os07g14280 LOC_Os10g35450 LOC_Os07g31840 LOC_Os05g46550 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g45930.1 |
| Rice Genome Annotation | LOC_Os05g45930.1 |
| Ricechip | LOC_Os05g45930.1 |
| KEGG | osa:4339444 dosa:Os05t0535900-01 |
| Entrez-Gene | 4339444 |