RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g45950.1 View Network Show in Genome Browser |
| Other Names | Os05g0536200 |
| Description | outer mitochondrial membrane porin, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26628165-26631666 Nucleotide Length: 843 |
| Protein-coding | LOC_Os05g45950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16910 LOC_Os03g20750 LOC_Os03g17700 LOC_Os01g40570 LOC_Os01g51770 LOC_Os03g02260 LOC_Os04g56710 LOC_Os02g53420 LOC_Os05g34770 LOC_Os03g04460 LOC_Os02g52940 More.. |
| Downstream Genes | LOC_Os09g19734 LOC_Os06g06090 LOC_Os10g32550 LOC_Os07g09890 LOC_Os10g38950 LOC_Os08g06060 LOC_Os08g44450 LOC_Os09g31180 LOC_Os09g31486 LOC_Os09g18320 LOC_Os06g44890 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g45950.1 |
| Rice Genome Annotation | LOC_Os05g45950.1 |
| Ricechip | LOC_Os05g45950.1 |
| KEGG | osa:4339446 dosa:Os05t0536200-01 |
| Entrez-Gene | 4339446 |