RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g46040.1 View Network Show in Genome Browser |
| Other Names | Os05g0537400 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26705164-26707820 Nucleotide Length: 1164 |
| Protein-coding | LOC_Os05g46040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g62500 LOC_Os02g02780 LOC_Os05g44990 LOC_Os01g13060 LOC_Os01g09200 LOC_Os05g03620 LOC_Os04g34300 LOC_Os05g04340 LOC_Os01g19150 LOC_Os01g14860 LOC_Os02g14530 More.. |
| Downstream Genes | LOC_Os08g31580 LOC_Os11g36180 LOC_Os12g06670 LOC_Os06g50030 LOC_Os09g18230 LOC_Os06g35530 LOC_Os06g38780 LOC_Os07g44290 LOC_Os06g23190 LOC_Os12g38860 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g46040.1 |
| Rice Genome Annotation | LOC_Os05g46040.1 |
| Ricechip | LOC_Os05g46040.1 |
| KEGG | osa:4339454 dosa:Os05t0537400-00 |
| Entrez-Gene | 4339454 |