RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g46210.1 View Network Show in Genome Browser |
| Other Names | Os05g0539500 |
| Description | OsPOP10 - Putative Prolyl Oligopeptidase homologue, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26801659-26805314 Nucleotide Length: 822 |
| Protein-coding | LOC_Os05g46210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19059 LOC_Os01g67250 LOC_Os01g72870 LOC_Os04g36620 LOC_Os03g51670 LOC_Os02g43850 LOC_Os02g43340 LOC_Os01g66240 LOC_Os04g57370 LOC_Os01g71300 LOC_Os02g18850 More.. |
| Downstream Genes | LOC_Os07g22840 LOC_Os07g41730 LOC_Os09g34860 LOC_Os07g29620 LOC_Os06g42860 LOC_Os09g23150 LOC_Os10g35540 LOC_Os07g38830 LOC_Os10g35520 LOC_Os10g35530 LOC_Os10g35490 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g46210.1 |
| Rice Genome Annotation | LOC_Os05g46210.1 |
| Ricechip | LOC_Os05g46210.1 |
| KEGG | osa:4339458 dosa:Os05t0539500-01 |
| Entrez-Gene | 4339458 |