RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g46360.1 View Network Show in Genome Browser |
| Other Names | Os05g0541200 |
| Description | possible lysine decarboxylase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26868332-26871153 Nucleotide Length: 672 |
| Protein-coding | LOC_Os05g46360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g37690 |
| Downstream Genes | LOC_Os06g03770 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY0-461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g46360.1 |
| Rice Genome Annotation | LOC_Os05g46360.1 |
| Ricechip | LOC_Os05g46360.1 |
| KEGG | osa:4339472 dosa:Os05t0541200-01 |
| Entrez-Gene | 4339472 |