RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g46480.2 View Network Show in Genome Browser |
| Other Names | Os05g0542500 |
| Description | late embryogenesis abundant protein, group 3, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26927607-26928902 Nucleotide Length: 603 |
| Protein-coding | LOC_Os05g46480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60580 LOC_Os05g31670 LOC_Os02g54140 |
| Downstream Genes | LOC_Os11g26790 LOC_Os11g26760 LOC_Os11g26570 LOC_Os11g26750 LOC_Os09g02180 LOC_Os11g26780 |
| Reference | |
|---|---|
| PubMed | 9218720 7870812 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g46480.2 |
| Rice Genome Annotation | LOC_Os05g46480.2 |
| Ricechip | LOC_Os05g46480.2 |
| KEGG | osa:4339480 dosa:Os05t0542500-02 |
| Entrez-Gene | 4339480 |