RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g46550.1 View Network Show in Genome Browser |
| Other Names | Os05g0543100 |
| Description | adaptor complexes medium subunit family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26952574-26955950 Nucleotide Length: 1293 |
| Protein-coding | LOC_Os05g46550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g23950 LOC_Os03g59660 LOC_Os03g57040 LOC_Os02g56110 LOC_Os02g37880 LOC_Os01g17430 LOC_Os05g24601 LOC_Os01g09860 LOC_Os01g50770 LOC_Os03g49610 LOC_Os02g48360 More.. |
| Downstream Genes | LOC_Os06g07090 LOC_Os11g07280 LOC_Os07g44350 LOC_Os07g01860 LOC_Os07g31840 LOC_Os09g32250 LOC_Os09g12600 LOC_Os08g13350 LOC_Os08g03670 LOC_Os06g09630 LOC_Os12g34370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g46550.1 |
| Rice Genome Annotation | LOC_Os05g46550.1 |
| Ricechip | LOC_Os05g46550.1 |
| KEGG | osa:4339486 dosa:Os05t0543100-01 |
| Entrez-Gene | 4339486 |