RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g46570.1 View Network Show in Genome Browser |
| Other Names | Os05g0543300 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 26962970-26965906 Nucleotide Length: 963 |
| Protein-coding | LOC_Os05g46570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72220 LOC_Os04g18010 LOC_Os03g63590 LOC_Os03g16110 LOC_Os03g51550 LOC_Os03g10990 LOC_Os03g58204 LOC_Os02g57450 LOC_Os04g39700 LOC_Os05g13300 LOC_Os02g13400 More.. |
| Downstream Genes | LOC_Os10g29560 LOC_Os09g39590 LOC_Os06g21470 LOC_Os12g07050 LOC_Os12g38380 LOC_Os07g08330 LOC_Os07g38430 LOC_Os06g36360 LOC_Os09g32976 LOC_Os08g23710 LOC_Os06g06880 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g46570.1 |
| Rice Genome Annotation | LOC_Os05g46570.1 |
| Ricechip | LOC_Os05g46570.1 |
| KEGG | osa:4339488 dosa:Os05t0543300-01 |
| Entrez-Gene | 4339488 |