RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g46780.1 View Network Show in Genome Browser |
| Other Names | Os05g0545600 |
| Description | transposon protein, putative, CACTA, En/Spm sub-class, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27093554-27099030 Nucleotide Length: 1467 |
| Protein-coding | LOC_Os05g46780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g46770 LOC_Os02g05310 LOC_Os04g33050 LOC_Os03g51870 LOC_Os03g59530 LOC_Os03g03560 LOC_Os03g07800 LOC_Os02g04490 LOC_Os02g08360 LOC_Os03g03130 LOC_Os05g03430 More.. |
| Downstream Genes | LOC_Os07g09320 LOC_Os10g34580 LOC_Os08g41710 LOC_Os12g30020 LOC_Os06g36940 LOC_Os11g43970 LOC_Os07g06980 LOC_Os11g07450 LOC_Os10g39120 LOC_Os07g03230 LOC_Os06g02510 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g46780.1 |
| Rice Genome Annotation | LOC_Os05g46780.1 |
| Ricechip | LOC_Os05g46780.1 |
| KEGG | osa:4339499 dosa:Os05t0545600-00 |
| Entrez-Gene | 4339499 |