RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g46860.1 View Network Show in Genome Browser |
| Other Names | Os05g0546700 |
| Description | FHA domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27125680-27127261 Nucleotide Length: 300 |
| Protein-coding | LOC_Os05g46860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04230 |
| Downstream Genes | LOC_Os07g39520 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g46860.1 |
| Rice Genome Annotation | LOC_Os05g46860.1 |
| Ricechip | LOC_Os05g46860.1 |
| KEGG | dosa:Os05t0546700-01 |