RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g47446.1 View Network Show in Genome Browser |
| Other Names | Os05g0547850 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27179219-27183778 Nucleotide Length: 387 |
| Protein-coding | LOC_Os05g47446 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g31090 LOC_Os02g55370 LOC_Os01g72240 LOC_Os01g17330 LOC_Os01g72250 LOC_Os01g58220 LOC_Os05g41900 LOC_Os02g03440 LOC_Os02g58640 LOC_Os04g42380 LOC_Os03g48590 More.. |
| Downstream Genes | LOC_Os07g42632 LOC_Os06g08320 LOC_Os07g44620 LOC_Os07g34589 LOC_Os08g05530 LOC_Os08g06200 LOC_Os11g43620 LOC_Os08g37444 LOC_Os09g33720 LOC_Os08g01620 LOC_Os07g47860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g47446.1 |
| Rice Genome Annotation | LOC_Os05g47446.1 |
| Ricechip | LOC_Os05g47446.1 |
| KEGG | osa:9269971 dosa:Os05t0547850-01 |
| Entrez-Gene | 9269971 |